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  5. Gb_08671

Gb_08671


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 694.0)


Gene families : OG0016282 (Archaeplastida) Phylogenetic Tree(s): OG0016282_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08671
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Gb_12553 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.07 Archaeplastida
MA_181514g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP Neighborhood
InterPro domains Description Start Stop
IPR032867 DYW_dom 1200 1324
IPR002885 Pentatricopeptide_repeat 479 507
IPR002885 Pentatricopeptide_repeat 641 670
IPR002885 Pentatricopeptide_repeat 509 536
IPR002885 Pentatricopeptide_repeat 928 958
IPR002885 Pentatricopeptide_repeat 613 639
IPR002885 Pentatricopeptide_repeat 898 926
IPR002885 Pentatricopeptide_repeat 225 250
IPR002885 Pentatricopeptide_repeat 866 892
IPR002885 Pentatricopeptide_repeat 416 445
IPR002885 Pentatricopeptide_repeat 835 863
IPR002885 Pentatricopeptide_repeat 253 283
IPR002885 Pentatricopeptide_repeat 57 80
IPR002885 Pentatricopeptide_repeat 672 699
IPR002885 Pentatricopeptide_repeat 804 832
IPR002885 Pentatricopeptide_repeat 1101 1125
IPR002885 Pentatricopeptide_repeat 388 413
IPR002885 Pentatricopeptide_repeat 447 476
IPR002885 Pentatricopeptide_repeat 1027 1075
IPR002885 Pentatricopeptide_repeat 149 197
IPR002885 Pentatricopeptide_repeat 701 748
IPR002885 Pentatricopeptide_repeat 540 585
IPR002885 Pentatricopeptide_repeat 313 360
No external refs found!