1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_08678

Gb_08678


Description : Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana (sp|p0c897|y3264_arath : 115.0)


Gene families : OG0000473 (Archaeplastida) Phylogenetic Tree(s): OG0000473_tree ,
OG_05_0000246 (LandPlants) Phylogenetic Tree(s): OG_05_0000246_tree ,
OG_06_0011721 (SeedPlants) Phylogenetic Tree(s): OG_06_0011721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08678
Cluster HCCA: Cluster_501

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_11125 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 Archaeplastida
Gb_37280 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g07050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_6958038g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g117260.2.1 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 32 435
No external refs found!