Gb_08706


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08706
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.03 Archaeplastida
Gb_10211 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_33057 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_33058 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_36497 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os02g21750.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_934204g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
Mp2g11920.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp7g04390.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.02 Archaeplastida
Pp3c1_7215V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Smo169182 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo230134 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
Smo410515 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo75690 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1010 1157
IPR011527 ABC1_TM_dom 670 938
IPR011527 ABC1_TM_dom 33 306
IPR003439 ABC_transporter-like 376 524
No external refs found!