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  5. Gb_08834

Gb_08834


Description : Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana (sp|q9ste1|pp333_arath : 568.0)


Gene families : OG0012934 (Archaeplastida) Phylogenetic Tree(s): OG0012934_tree ,
OG_05_0012888 (LandPlants) Phylogenetic Tree(s): OG_05_0012888_tree ,
OG_06_0012915 (SeedPlants) Phylogenetic Tree(s): OG_06_0012915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08834
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00030400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 234 280
IPR002885 Pentatricopeptide_repeat 636 684
IPR002885 Pentatricopeptide_repeat 132 179
IPR002885 Pentatricopeptide_repeat 435 483
IPR002885 Pentatricopeptide_repeat 535 582
IPR002885 Pentatricopeptide_repeat 712 735
IPR002885 Pentatricopeptide_repeat 208 233
No external refs found!