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Gb_08869


Description : component SecY1 of thylakoid membrane Sec1 translocation system


Gene families : OG0006621 (Archaeplastida) Phylogenetic Tree(s): OG0006621_tree ,
OG_05_0008816 (LandPlants) Phylogenetic Tree(s): OG_05_0008816_tree ,
OG_06_0010007 (SeedPlants) Phylogenetic Tree(s): OG_06_0010007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08869
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00172430 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.thylakoid membrane... 0.02 Archaeplastida
Cre16.g681900 No alias Protein translocation.chloroplast.thylakoid membrane... 0.02 Archaeplastida
GSVIVT01032310001 No alias Protein translocation.chloroplast.thylakoid membrane... 0.05 Archaeplastida
LOC_Os08g15460.1 No alias component SecY1 of thylakoid membrane Sec1 translocation system 0.04 Archaeplastida
Mp1g15830.1 No alias component SecY1 of thylakoid membrane Sec1 translocation system 0.03 Archaeplastida
Pp3c16_5240V3.1 No alias SECY homolog 1 0.05 Archaeplastida
Solyc07g006520.3.1 No alias component SecY1 of thylakoid membrane Sec1 translocation system 0.05 Archaeplastida
Zm00001e039903_P001 No alias component SecY1 of thylakoid membrane Sec1 translocation system 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0035596 methylthiotransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0050497 transferase activity, transferring alkylthio groups IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 196 391
No external refs found!