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  5. Gb_09093

Gb_09093


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG0000511 (Archaeplastida) Phylogenetic Tree(s): OG0000511_tree ,
OG_05_0003960 (LandPlants) Phylogenetic Tree(s): OG_05_0003960_tree ,
OG_06_0004443 (SeedPlants) Phylogenetic Tree(s): OG_06_0004443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09093
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
AT3G27720 ARI4, ATARI4 IBR domain containing protein 0.02 Archaeplastida
GSVIVT01009627001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_88915g0010 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Pp3c4_29960V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc01g109280.3.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Archaeplastida
Zm00001e007730_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Zm00001e024244_P001 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002867 IBR_dom 266 307
IPR002867 IBR_dom 187 249
IPR027370 Znf-RING_LisH 116 160
No external refs found!