1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_09128

Gb_09128


Description : calcium-activated protease (Phytocalpain)


Gene families : OG0002400 (Archaeplastida) Phylogenetic Tree(s): OG0002400_tree ,
OG_05_0007273 (LandPlants) Phylogenetic Tree(s): OG_05_0007273_tree ,
OG_06_0009990 (SeedPlants) Phylogenetic Tree(s): OG_06_0009990_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09128
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00125370 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AT1G55350 EMB80, EMB1275,... calpain-type cysteine protease family 0.05 Archaeplastida
GSVIVT01025470001 No alias Protein degradation.peptidase families.cysteine-type... 0.1 Archaeplastida
LOC_Os02g47970.1 No alias calcium-activated protease (Phytocalpain) 0.05 Archaeplastida
MA_129368g0010 No alias calcium-activated protease (Phytocalpain) 0.06 Archaeplastida
MA_8967622g0010 No alias Calpain-type cysteine protease DEK1 OS=Arabidopsis... 0.07 Archaeplastida
Pp3c17_17550V3.1 No alias calpain-type cysteine protease family 0.03 Archaeplastida
Smo235391 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
Smo236021 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Solyc12g100360.1.1 No alias calcium-activated protease (Phytocalpain) 0.07 Archaeplastida
Zm00001e001376_P002 No alias calcium-activated protease (Phytocalpain) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 1709 2008
IPR022682 Calpain_domain_III 2020 2158
No external refs found!