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  5. Gb_09270

Gb_09270


Description : GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana (sp|q3e7i6|gdl11_arath : 270.0)


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0000061 (SeedPlants) Phylogenetic Tree(s): OG_06_0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09270
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00212280 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00217880 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00038p00165200 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00049p00054830 evm_27.TU.AmTr_v1... GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G28570 No alias SGNH hydrolase-type esterase superfamily protein 0.02 Archaeplastida
AT1G28590 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28650 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28660 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28670 ARAB-1 GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
AT3G48460 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Archaeplastida
GSVIVT01007554001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01020673001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.05 Archaeplastida
Gb_16009 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os01g11700.1 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g11710.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11750.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g11760.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g12320.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g12381.1 No alias GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g46120.1 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os01g46169.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g25030.1 No alias Sinapine esterase OS=Brassica napus... 0.03 Archaeplastida
LOC_Os03g62740.1 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os05g43090.1 No alias GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g43100.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g43120.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g06250.2 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os06g34120.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g44780.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g31940.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
MA_190687g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_60155g0010 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c17_3620V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Pp3c2_2900V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Smo83754 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g099040.4.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
Solyc01g099050.3.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g111550.4.1 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g096620.1.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006337_P001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011116_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e014225_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016450_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e020314_P001 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026047_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026050_P001 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027180_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e027181_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030049_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e032079_P005 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e036463_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037096_P003 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Neighborhood
BP GO:0009245 lipid A biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046493 lipid A metabolic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:1901269 lipooligosaccharide metabolic process IEP Neighborhood
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 26 348
No external refs found!