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  5. Gb_09382

Gb_09382


Description : Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana (sp|q9lw63|pp251_arath : 538.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09382
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT3G12770 MEF22 mitochondrial editing factor 22 0.04 Archaeplastida
Gb_00194 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida
Gb_01226 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_02031 No alias RNA editing factor (MEF19) 0.06 Archaeplastida
Gb_02065 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.08 Archaeplastida
Gb_02911 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_03137 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_03693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_04144 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.07 Archaeplastida
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_04844 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_05259 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.12 Archaeplastida
Gb_05649 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_06115 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.1 Archaeplastida
Gb_07617 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.08 Archaeplastida
Gb_08569 No alias RNA editing factor (OTP82) 0.12 Archaeplastida
Gb_09146 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.07 Archaeplastida
Gb_09407 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.05 Archaeplastida
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
Gb_10709 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Gb_10726 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_11222 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_11667 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 Archaeplastida
Gb_13405 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 Archaeplastida
Gb_15129 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.11 Archaeplastida
Gb_16017 No alias RNA editing factor (MEF19) 0.09 Archaeplastida
Gb_16070 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_16955 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_17095 No alias Putative pentatricopeptide repeat-containing protein... 0.1 Archaeplastida
Gb_17321 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
Gb_19828 No alias RNA editing factor (OTP82) 0.06 Archaeplastida
Gb_20503 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_21237 No alias Putative pentatricopeptide repeat-containing protein... 0.09 Archaeplastida
Gb_21714 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_23267 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_24823 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_25283 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.12 Archaeplastida
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Gb_26311 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_27521 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
Gb_27797 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_28038 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.08 Archaeplastida
Gb_28343 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 Archaeplastida
Gb_29557 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
Gb_30146 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.08 Archaeplastida
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_30993 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_31546 No alias RNA editing factor (MEF3) 0.09 Archaeplastida
Gb_32447 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
Gb_32448 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Gb_33328 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_33411 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_33575 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_33697 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_34248 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_34297 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_34298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
Gb_35108 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 Archaeplastida
Gb_35202 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_35645 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 Archaeplastida
Gb_36172 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.07 Archaeplastida
Gb_36434 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.04 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.06 Archaeplastida
Gb_39298 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_39440 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.08 Archaeplastida
Gb_40434 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 Archaeplastida
LOC_Os03g63260.3 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
LOC_Os08g25280.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
MA_10277392g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_10426261g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_10427342g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 Archaeplastida
MA_10429371g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
MA_10430355g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.06 Archaeplastida
MA_109134g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_110g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_112849g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 Archaeplastida
MA_11454g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
MA_115669g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_116829g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
MA_11765g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 Archaeplastida
MA_117676g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_121267g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_122899g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 Archaeplastida
MA_131g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_136188g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_140591g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_16917g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.09 Archaeplastida
MA_177230g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 Archaeplastida
MA_18383g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_185098g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.04 Archaeplastida
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_193080g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 Archaeplastida
MA_19715g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_20599g0020 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.02 Archaeplastida
MA_20899g0020 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
MA_215359g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_24849g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_25515g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_27726g0010 No alias RNA editing factor (ECB2/VAC1) 0.03 Archaeplastida
MA_28390g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_285318g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.07 Archaeplastida
MA_291996g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_2991g0010 No alias RNA editing factor (MEF12) 0.02 Archaeplastida
MA_30632g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_32723g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
MA_33151g0010 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.05 Archaeplastida
MA_33533g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
MA_3471g0010 No alias RNA editing factor (MEF19) 0.04 Archaeplastida
MA_3502g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
MA_36643g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.03 Archaeplastida
MA_39263g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_43727g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
MA_442926g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_4503g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
MA_46875g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 Archaeplastida
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_50118g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.07 Archaeplastida
MA_50789g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 Archaeplastida
MA_519985g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 Archaeplastida
MA_5481g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
MA_56322g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_60579g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.08 Archaeplastida
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 Archaeplastida
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.04 Archaeplastida
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
MA_68933g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.02 Archaeplastida
MA_70677g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 Archaeplastida
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_77437g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 Archaeplastida
MA_794605g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_81105g0010 No alias RNA editing factor (OTP82) 0.08 Archaeplastida
MA_8319g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.09 Archaeplastida
MA_84538g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 Archaeplastida
MA_87646g0010 No alias RNA editing factor (MEF13) 0.04 Archaeplastida
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 Archaeplastida
MA_89214g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
MA_9354530g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.06 Archaeplastida
MA_944980g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.14 Archaeplastida
MA_953240g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_953793g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.02 Archaeplastida
MA_96662g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Smo131642 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 Archaeplastida
Smo79457 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Solyc02g088470.1.1 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.03 Archaeplastida
Zm00001e003284_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Zm00001e005246_P001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.06 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.04 Archaeplastida
Zm00001e013713_P001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.02 Archaeplastida
Zm00001e015727_P001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 Archaeplastida
Zm00001e016923_P001 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Zm00001e020567_P001 No alias RNA editing factor (MEF7) 0.02 Archaeplastida
Zm00001e022858_P001 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Archaeplastida
Zm00001e030887_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Zm00001e036302_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041694_P001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 603 631
IPR002885 Pentatricopeptide_repeat 67 90
IPR002885 Pentatricopeptide_repeat 436 461
IPR002885 Pentatricopeptide_repeat 234 259
IPR032867 DYW_dom 637 692
IPR002885 Pentatricopeptide_repeat 260 307
IPR002885 Pentatricopeptide_repeat 159 206
IPR002885 Pentatricopeptide_repeat 361 408
IPR002885 Pentatricopeptide_repeat 462 509
No external refs found!