Gb_09731


Description : transcription factor (JUMONJI)


Gene families : OG0001111 (Archaeplastida) Phylogenetic Tree(s): OG0001111_tree ,
OG_05_0001701 (LandPlants) Phylogenetic Tree(s): OG_05_0001701_tree ,
OG_06_0001587 (SeedPlants) Phylogenetic Tree(s): OG_06_0001587_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09731
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00062020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
Solyc04g009990.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003349 JmjN 116 149
IPR004198 Znf_C5HC2 648 698
IPR003347 JmjC_dom 490 541
IPR003347 JmjC_dom 354 428
No external refs found!