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  5. Gb_09995

Gb_09995


Description : Protein trichome birefringence OS=Arabidopsis thaliana (sp|q9fg35|tbr_arath : 82.4)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0015828 (LandPlants) Phylogenetic Tree(s): OG_05_0015828_tree ,
OG_06_0015582 (SeedPlants) Phylogenetic Tree(s): OG_06_0015582_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09995
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.02 Archaeplastida
GSVIVT01010030001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011120001 No alias Protein trichome birefringence-like 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01030284001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01035039001 No alias Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_06481 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os05g28830.1 No alias xylan O-acetyltransferase (XOAT) 0.01 Archaeplastida
LOC_Os06g34060.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
MA_10143614g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.03 Archaeplastida
MA_366027g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc09g015350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc10g076400.2.1 No alias xylan O-acetyltransferase (XOAT) 0.11 Archaeplastida
Zm00001e016007_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e017519_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 158 215
No external refs found!