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Gb_10018


Description : DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana (sp|q9fft9|rh32_arath : 536.0)


Gene families : OG0000482 (Archaeplastida) Phylogenetic Tree(s): OG0000482_tree ,
OG_05_0006899 (LandPlants) Phylogenetic Tree(s): OG_05_0006899_tree ,
OG_06_0007714 (SeedPlants) Phylogenetic Tree(s): OG_06_0007714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10018
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225030 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 Archaeplastida
AT2G40700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
AT3G18600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G05450 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Cre03.g156150 No alias DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre03.g188550 No alias DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa... 0.02 Archaeplastida
Cre07.g314900 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os01g07080.1 No alias DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os03g58810.1 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os05g01990.1 No alias DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa... 0.03 Archaeplastida
MA_10334041g0020 No alias DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c1_22540V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Smo104808 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e011842_P001 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e027024_P001 No alias DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025313 DUF4217 334 392
IPR001650 Helicase_C 204 291
IPR011545 DEAD/DEAH_box_helicase_dom 14 151
No external refs found!