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  5. Gb_10114

Gb_10114


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 140.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10114
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.17 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.15 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.51 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Cre01.g006402 No alias No description available 0.02 Archaeplastida
Gb_00684 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.13 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_12464 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_14370 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.15 Archaeplastida
Gb_16342 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_18694 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_18721 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_20038 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.11 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_22113 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_23759 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 Archaeplastida
Gb_26998 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_35925 No alias Uncharacterized mitochondrial protein AtMg00860... 0.07 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Pp3c3_35120V3.1 No alias No annotation 0.02 Archaeplastida
Solyc08g041685.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 909 1069
No external refs found!