Gb_10216


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10216
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00075460 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G27940 PGP13 P-glycoprotein 13 0.03 Archaeplastida
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 Archaeplastida
AT3G62150 PGP21 P-glycoprotein 21 0.03 Archaeplastida
AT4G01830 PGP5 P-glycoprotein 5 0.02 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.04 Archaeplastida
GSVIVT01013125001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017696001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os01g35030.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_6870g0010 No alias subfamily ABCB transporter 0.04 Archaeplastida
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 Archaeplastida
Mp2g06270.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Mp7g04390.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.02 Archaeplastida
Smo92485 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc03g122070.3.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003866_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e019933_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 386 534
IPR011527 ABC1_TM_dom 681 943
IPR011527 ABC1_TM_dom 56 317
IPR003439 ABC_transporter-like 1013 1162
No external refs found!