AT1G09410

Description : pentatricopeptide (PPR) repeat-containing protein

Gene families : OG0048020 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0047935 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042780 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G09410
Cluster	HCCA: Cluster_232

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016553	base conversion or substitution editing	IEP	Neighborhood
BP	GO:0016554	cytidine to uridine editing	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	395	443
IPR032867	DYW_dom	570	695
IPR002885	Pentatricopeptide_repeat	176	199
IPR002885	Pentatricopeptide_repeat	202	229
IPR002885	Pentatricopeptide_repeat	80	110
IPR002885	Pentatricopeptide_repeat	142	168
IPR002885	Pentatricopeptide_repeat	298	327
IPR002885	Pentatricopeptide_repeat	111	140
IPR002885	Pentatricopeptide_repeat	235	261
IPR002885	Pentatricopeptide_repeat	472	496
IPR002885	Pentatricopeptide_repeat	267	295
IPR002885	Pentatricopeptide_repeat	50	79

External Links

No external refs found!

AT1G09410

Expression Profile

Co-expression Networks

Functional Annotation