| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | Neighborhood |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
| CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Neighborhood |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Neighborhood |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
| CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Neighborhood |
| CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
| CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| MF | GO:0019900 | kinase binding | IEP | Neighborhood |
| MF | GO:0019901 | protein kinase binding | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Neighborhood |
| CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
| BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
| CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
| CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Neighborhood |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Neighborhood |
| BP | GO:0043549 | regulation of kinase activity | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044437 | vacuolar part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0045275 | respiratory chain complex III | IEP | Neighborhood |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Neighborhood |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051338 | regulation of transferase activity | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| CC | GO:0070069 | cytochrome complex | IEP | Neighborhood |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
| CC | GO:0098803 | respiratory chain complex | IEP | Neighborhood |
| BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
