Gb_10419


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000340 (SeedPlants) Phylogenetic Tree(s): OG_06_0000340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10419
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00104280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT3G10470 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT3G49930 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G53600 No alias C2H2-type zinc finger family protein 0.02 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.01 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.03 Archaeplastida
GSVIVT01037364001 No alias Zinc finger protein ZAT2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_06485 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os01g62130.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g17150.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os04g46670.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g20580.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os10g40660.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os11g47630.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os12g39400.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_922988g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c21_440V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc01g090840.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc02g088670.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc04g077980.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g060480.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e001253_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003413_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006181_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e006183_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e028782_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e028784_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e029605_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038074_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!