AT2G25110 (SDF2, AtSDF2, ATSDL)


Aliases : SDF2, AtSDF2, ATSDL

Description : stromal cell-derived factor 2-like protein precursor


Gene families : OG0003267 (Archaeplastida) Phylogenetic Tree(s): OG0003267_tree ,
OG_05_0003564 (LandPlants) Phylogenetic Tree(s): OG_05_0003564_tree ,
OG_06_0004857 (SeedPlants) Phylogenetic Tree(s): OG_06_0004857_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25110
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000215.14 No alias Stromal cell-derived factor 2-like protein... 0.02 Archaeplastida
Cre13.g571750 No alias Stromal cell-derived factor 2-like protein... 0.16 Archaeplastida
Gb_21723 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.03 Archaeplastida
LOC_Os08g17680.1 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.07 Archaeplastida
LOC_Os08g34190.1 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.21 Archaeplastida
Mp7g08270.1 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.02 Archaeplastida
Smo271847 No alias Stromal cell-derived factor 2-like protein... 0.03 Archaeplastida
Solyc03g117020.4.1 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.1 Archaeplastida
Zm00001e022473_P002 No alias component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.14 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
BP GO:0042742 defense response to bacterium IMP Interproscan
BP GO:0050832 defense response to fungus IMP Interproscan
BP GO:0052033 pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP Neighborhood
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000323 lytic vacuole IEP Neighborhood
CC GO:0000325 plant-type vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
CC GO:0000327 lytic vacuole within protein storage vacuole IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006004 fucose metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006984 ER-nucleus signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0009969 xyloglucan biosynthetic process IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010256 endomembrane system organization IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042353 fucose biosynthetic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR016093 MIR_motif 78 201
No external refs found!