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  5. Gb_10524

Gb_10524


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0002612 (SeedPlants) Phylogenetic Tree(s): OG_06_0002612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10524
Cluster HCCA: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00142260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AMTR_s00169p00042500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.04 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.02 Archaeplastida
GSVIVT01010625001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01016330001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01018486001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
GSVIVT01032592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032752001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_00144 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_19388 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_20398 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_127139g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_292200g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_66501g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Pp3c19_19400V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c19_19610V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Pp3c22_5950V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc05g048740.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g071660.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc12g100150.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 44 140
No external refs found!