1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_10598

Gb_10598


Description : Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana (sp|q9fj62|gpdl4_arath : 604.0)


Gene families : OG0001385 (Archaeplastida) Phylogenetic Tree(s): OG0001385_tree ,
OG_05_0000896 (LandPlants) Phylogenetic Tree(s): OG_05_0000896_tree ,
OG_06_0001220 (SeedPlants) Phylogenetic Tree(s): OG_06_0001220_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10598
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00174750 evm_27.TU.AmTr_v1... Glycerophosphodiester phosphodiesterase GDPDL3... 0.04 Archaeplastida
AMTR_s00252p00015420 evm_27.TU.AmTr_v1... Glycerophosphodiester phosphodiesterase GDPDL6... 0.04 Archaeplastida
AT5G58050 SVL4 SHV3-like 4 0.03 Archaeplastida
AT5G58170 SVL5 SHV3-like 5 0.04 Archaeplastida
GSVIVT01003731001 No alias Glycerophosphodiester phosphodiesterase GDPDL6... 0.02 Archaeplastida
LOC_Os02g37590.1 No alias Glycerophosphodiester phosphodiesterase GDPDL3... 0.06 Archaeplastida
Mp8g07940.1 No alias Glycerophosphodiester phosphodiesterase GDPDL7... 0.03 Archaeplastida
Pp3c2_26540V3.1 No alias SHV3-like 5 0.03 Archaeplastida
Pp3c2_28200V3.1 No alias PLC-like phosphodiesterase family protein 0.03 Archaeplastida
Solyc02g014490.4.1 No alias Glycerophosphodiester phosphodiesterase GDPDL7... 0.02 Archaeplastida
Solyc07g065120.3.1 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.04 Archaeplastida
Solyc12g014570.2.1 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 Archaeplastida
Zm00001e014970_P001 No alias Glycerophosphodiester phosphodiesterase GDPDL3... 0.11 Archaeplastida
Zm00001e024367_P002 No alias Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 Archaeplastida
Zm00001e041063_P001 No alias Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 51 336
IPR030395 GP_PDE_dom 366 657
No external refs found!