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  5. Gb_10818

Gb_10818


Description : conjugation E2 protein


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10818
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.02 Archaeplastida
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.05 Archaeplastida
Cre06.g292800 No alias Protein degradation.peptide... 0.02 Archaeplastida
GSVIVT01014758001 No alias Protein degradation.peptide... 0.04 Archaeplastida
Mp5g21800.1 No alias conjugation E2 protein 0.02 Archaeplastida
Mp7g03500.1 No alias conjugation E2 protein. E2 conjugating component COP10... 0.03 Archaeplastida
Pp3c23_500V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.04 Archaeplastida
Pp3c24_130V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.03 Archaeplastida
Smo270384 No alias Protein degradation.peptide... 0.04 Archaeplastida
Solyc08g008220.3.1 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e019454_P001 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e027303_P001 No alias conjugation E2 protein 0.03 Archaeplastida
Zm00001e028859_P002 No alias conjugation E2 protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!