1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G25360

AT2G25360


Description : RING/U-box superfamily protein


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0004760 (LandPlants) Phylogenetic Tree(s): OG_05_0004760_tree ,
OG_06_0003098 (SeedPlants) Phylogenetic Tree(s): OG_06_0003098_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25360
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00117090 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT2G16520 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 Archaeplastida
AT2G25370 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G45460 No alias IBR domain containing protein 0.06 Archaeplastida
AT3G45470 No alias IBR domain containing protein 0.04 Archaeplastida
AT3G45480 No alias RING/U-box protein with C6HC-type zinc finger 0.05 Archaeplastida
AT3G45540 No alias RING/U-box protein with C6HC-type zinc finger 0.06 Archaeplastida
AT3G45560 No alias zinc finger (C3HC4-type RING finger) family protein 0.06 Archaeplastida
AT3G45570 No alias RING/U-box protein with C6HC-type zinc finger domain 0.04 Archaeplastida
Cre05.g238374 No alias ATP-dependent RNA helicase DEAH11, chloroplastic... 0.02 Archaeplastida
Gb_32390 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
LOC_Os08g35060.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 Archaeplastida
LOC_Os08g35070.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.04 Archaeplastida
MA_64485g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
Zm00001e034155_P001 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007163 establishment or maintenance of cell polarity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015296 anion:cation symporter activity IEP Neighborhood
MF GO:0015377 cation:chloride symporter activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0030010 establishment of cell polarity IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0090451 cotyledon boundary formation IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:2000008 regulation of protein localization to cell surface IEP Neighborhood
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 1 78
IPR002867 IBR_dom 159 224
IPR002867 IBR_dom 238 292
IPR018957 Znf_C3HC4_RING-type 90 124
No external refs found!