1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_10882

Gb_10882


Description : Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana (sp|q9ld37|cng20_arath : 91.3)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0002629 (LandPlants) Phylogenetic Tree(s): OG_05_0002629_tree ,
OG_06_0001915 (SeedPlants) Phylogenetic Tree(s): OG_06_0001915_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10882
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270020 evm_27.TU.AmTr_v1... External stimuli response.temperature.temperature... 0.02 Archaeplastida
AMTR_s00024p00155680 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
AMTR_s00210p00019190 evm_27.TU.AmTr_v1... Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
GSVIVT01015970001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.06 Archaeplastida
GSVIVT01029404001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01033170001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
MA_167620g0010 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.03 Archaeplastida
Mp6g01920.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.01 Archaeplastida
Pp3c17_22030V3.1 No alias cyclic nucleotide gated channel 9 0.01 Archaeplastida
Smo113786 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
Solyc06g051920.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!