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  5. AT2G25570

AT2G25570


Description : binding


Gene families : OG0008361 (Archaeplastida) Phylogenetic Tree(s): OG0008361_tree ,
OG_05_0008992 (LandPlants) Phylogenetic Tree(s): OG_05_0008992_tree ,
OG_06_0007339 (SeedPlants) Phylogenetic Tree(s): OG_06_0007339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25570
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00138090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cpa|evm.model.tig00000889.43 No alias No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004300 enoyl-CoA hydratase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008419 RNA lariat debranching enzyme activity IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
CC GO:0016514 SWI/SNF complex IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043153 entrainment of circadian clock by photoperiod IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis IEP Neighborhood
BP GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006597 Sel1-like 164 198
IPR006597 Sel1-like 127 159
No external refs found!