Gb_11216

Description : no hits & (original description: none)

Gene families : OG0001635 (Archaeplastida) Phylogenetic Tree(s): OG0001635_tree ,
OG_05_0001127 (LandPlants) Phylogenetic Tree(s): OG_05_0001127_tree ,
OG_06_0000588 (SeedPlants) Phylogenetic Tree(s): OG_06_0000588_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11216
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Gb_01092	No alias	no hits & (original description: none)	0.09	Archaeplastida
Gb_05313	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_09480	No alias	no hits & (original description: none)	0.14	Archaeplastida
Gb_10067	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_10696	No alias	no hits & (original description: none)	0.11	Archaeplastida
Gb_12818	No alias	no hits & (original description: none)	0.2	Archaeplastida
Gb_18271	No alias	no hits & (original description: none)	0.08	Archaeplastida
Gb_35502	No alias	no hits & (original description: none)	0.14	Archaeplastida
Gb_39795	No alias	no hits & (original description: none)	0.15	Archaeplastida
Gb_40583	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	6	101

External Links

No external refs found!