Gb_11519


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 127.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11519
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00173380 No alias No description available 0.01 Archaeplastida
ChrSy.fgenesh.mRNA.34 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
ChrSy.fgenesh.mRNA.40 No alias no hits & (original description: none) 0.02 Archaeplastida
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Cpa|evm.model.tig00001038.11 No alias No description available 0.03 Archaeplastida
Gb_03960 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_09686 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_10577 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_12173 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_14590 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_21502 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_21510 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_23067 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_26446 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_27013 No alias no hits & (original description: none) 0.14 Archaeplastida
Gb_29150 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_30875 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_30891 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_32988 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_33453 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Gb_33463 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.2 Archaeplastida
Gb_34528 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.01 Archaeplastida
Gb_35925 No alias Uncharacterized mitochondrial protein AtMg00860... 0.14 Archaeplastida
Solyc09g055185.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 466 546
No external refs found!