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  5. Gb_11539

Gb_11539


Description : actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11539
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G49240 ACT8 actin 8 0.03 Archaeplastida
AT3G18780 DER1, LSR2, ACT2, ENL2 actin 2 0.03 Archaeplastida
AT3G53750 ACT3 actin 3 0.03 Archaeplastida
Cpa|evm.model.tig00021350.36 No alias Cytoskeleton.microfilament network.actin filament protein 0.01 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os11g06390.1 No alias actin filament protein 0.01 Archaeplastida
LOC_Os12g06660.1 No alias actin filament protein 0.02 Archaeplastida
MA_7238328g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96086g0010 No alias actin filament protein 0.02 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.05 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.05 Archaeplastida
Pp3c3_33440V3.1 No alias actin 7 0.02 Archaeplastida
Pp3c4_6260V3.1 No alias actin 7 0.03 Archaeplastida
Solyc04g011500.3.1 No alias actin filament protein 0.05 Archaeplastida
Solyc11g065990.2.1 No alias actin filament protein 0.03 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.01 Archaeplastida
Zm00001e027663_P005 No alias actin filament protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!