1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G26135

AT2G26135


Description : RING/U-box protein with C6HC-type zinc finger


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0004760 (LandPlants) Phylogenetic Tree(s): OG_05_0004760_tree ,
OG_06_0003098 (SeedPlants) Phylogenetic Tree(s): OG_06_0003098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G26135
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT2G16520 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
AT2G25370 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G45460 No alias IBR domain containing protein 0.03 Archaeplastida
AT3G45470 No alias IBR domain containing protein 0.04 Archaeplastida
AT3G45480 No alias RING/U-box protein with C6HC-type zinc finger 0.04 Archaeplastida
AT3G45500 No alias BEST Arabidopsis thaliana protein match is: RING/U-box... 0.04 Archaeplastida
AT3G45540 No alias RING/U-box protein with C6HC-type zinc finger 0.03 Archaeplastida
AT3G45560 No alias zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
AT3G45570 No alias RING/U-box protein with C6HC-type zinc finger domain 0.04 Archaeplastida
AT3G45580 No alias RING/U-box protein with C6HC-type zinc finger 0.03 Archaeplastida
AT3G53690 No alias RING/U-box superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 153 198
IPR002867 IBR_dom 301 346
IPR002867 IBR_dom 224 285
IPR002156 RNaseH_domain 42 136
No external refs found!