Gb_11804

Description : mRNA poly-A-tail binding factor (PABP)

Gene families : OG0000771 (Archaeplastida) Phylogenetic Tree(s): OG0000771_tree ,
OG_05_0000645 (LandPlants) Phylogenetic Tree(s): OG_05_0000645_tree ,
OG_06_0008219 (SeedPlants) Phylogenetic Tree(s): OG_06_0008219_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11804
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00051p00026490	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation initiation.mRNA...	0.04	Archaeplastida
AT2G23350	PABP4, PAB4	poly(A) binding protein 4	0.03	Archaeplastida
LOC_Os04g42600.2	No alias	mRNA poly-A-tail binding factor (PABP)	0.03	Archaeplastida
Mp7g18970.1	No alias	mRNA poly-A-tail binding factor (PABP)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	293	361
IPR000504	RRM_dom	190	258
IPR000504	RRM_dom	12	82
IPR000504	RRM_dom	100	167
IPR002004	PABP_HYD	561	627

External Links

No external refs found!