Gb_11856

Description : Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana (sp|p42736|rap23_arath : 88.2)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0026639 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11856
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00218200	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF015...	0.04	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.01	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.01	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
AMTR_s00111p00051610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT3G11020	DREB2B, DREB2	DRE/CRT-binding protein 2B	0.01	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01035911001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01213	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.01	Archaeplastida
Gb_07949	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_12588	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_12965	No alias	Ethylene-responsive transcription factor ABR1...	0.02	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.01	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_34848	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os02g43940.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.01	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_18081g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_5805979g0010	No alias	Ethylene-responsive transcription factor 1A...	0.05	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.09	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e006604_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.01	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.01	Archaeplastida
Zm00001e019026_P001	No alias	transcription factor (ERF)	0.01	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.01	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.1	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e040124_P001	No alias	no hits & (original description: none)	0.12	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	57	106

External Links

No external refs found!

Gb_11856

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation