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  5. Gb_12278

Gb_12278


Description : pectate lyase


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12278
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_107676g0010 No alias Pectate lyase 1 OS=Hesperocyparis arizonica... 0.02 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.04 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.02 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.06 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.02 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.03 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Solyc05g055510.3.1 No alias pectate lyase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 67 215
No external refs found!