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  5. Gb_12318

Gb_12318


Description : no hits & (original description: none)


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0000221 (SeedPlants) Phylogenetic Tree(s): OG_06_0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12318
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00213730 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00056p00089620 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 Archaeplastida
AMTR_s00056p00215980 evm_27.TU.AmTr_v1... Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1... 0.04 Archaeplastida
AMTR_s00060p00214220 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 Archaeplastida
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT1G52900 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 Archaeplastida
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT1G56540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT1G57630 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.02 Archaeplastida
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G64070 RLM1 Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G69550 No alias disease resistance protein (TIR-NBS-LRR class) 0.05 Archaeplastida
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 Archaeplastida
AT1G72940 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.04 Archaeplastida
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.06 Archaeplastida
AT3G25505 No alias No description available 0.02 Archaeplastida
AT3G44400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G44630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G44670 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT4G16857 No alias No description available 0.03 Archaeplastida
AT4G16860 RPP4 Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.04 Archaeplastida
AT4G16900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT4G16950 RPP5 Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
AT4G16990 RLM3 disease resistance protein (TIR-NBS class), putative 0.03 Archaeplastida
AT5G11250 No alias Disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
AT5G18360 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Archaeplastida
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 Archaeplastida
AT5G40060 No alias Disease resistance protein (NBS-LRR class) family 0.04 Archaeplastida
AT5G40910 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G46270 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G46450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 Archaeplastida
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.04 Archaeplastida
AT5G46510 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 Archaeplastida
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01012762001 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
GSVIVT01022982001 No alias No description available 0.04 Archaeplastida
GSVIVT01022984001 No alias External stimuli response.biotic stress.pathogen... 0.04 Archaeplastida
GSVIVT01025907001 No alias External stimuli response.biotic stress.pathogen... 0.05 Archaeplastida
GSVIVT01026003001 No alias External stimuli response.biotic stress.pathogen... 0.05 Archaeplastida
GSVIVT01034461001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 Archaeplastida
GSVIVT01036400001 No alias External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
GSVIVT01038755001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 Archaeplastida
Gb_00097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 Archaeplastida
Gb_00098 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 Archaeplastida
Gb_00819 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_04748 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_11158 No alias effector receptor (NLR) 0.11 Archaeplastida
Gb_11355 No alias Probable disease resistance protein RPP1 OS=Arabidopsis... 0.07 Archaeplastida
Gb_17461 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_26048 No alias effector receptor (NLR) 0.05 Archaeplastida
Gb_26262 No alias effector receptor (NLR) 0.03 Archaeplastida
Gb_29198 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 Archaeplastida
Gb_29339 No alias effector receptor (NLR) 0.05 Archaeplastida
MA_10433003g0040 No alias effector receptor (NLR) 0.06 Archaeplastida
Solyc01g102840.3.1 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc05g007850.2.1 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc07g052780.3.1 No alias effector receptor (NLR) 0.04 Archaeplastida
Solyc07g055380.1.1 No alias effector receptor (NLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!