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  5. Gb_12426

Gb_12426


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 630.0)


Gene families : OG0003648 (Archaeplastida) Phylogenetic Tree(s): OG0003648_tree ,
OG_05_0060646 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0053909 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12426
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
MA_113202g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.08 Archaeplastida
MA_681272g0010 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 532 578
IPR002885 Pentatricopeptide_repeat 165 213
IPR002885 Pentatricopeptide_repeat 297 345
IPR032867 DYW_dom 705 828
IPR002885 Pentatricopeptide_repeat 398 427
IPR002885 Pentatricopeptide_repeat 88 136
IPR002885 Pentatricopeptide_repeat 606 629
IPR002885 Pentatricopeptide_repeat 670 700
IPR002885 Pentatricopeptide_repeat 505 528
IPR002885 Pentatricopeptide_repeat 241 267
No external refs found!