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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 393.0)
Gene families : OG0001636 (Archaeplastida) Phylogenetic Tree(s): OG0001636_tree ,
OG_05_0001022 (LandPlants) Phylogenetic Tree(s): OG_05_0001022_tree ,
OG_06_0000515 (SeedPlants) Phylogenetic Tree(s): OG_06_0000515_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_12432 | |
| Cluster | HCCA: Cluster_236 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_01199 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.17 | Archaeplastida | |
| Gb_01558 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_01732 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
| Gb_01798 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_05178 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_06493 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
| Gb_06982 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Gb_14007 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_15515 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
| Gb_17944 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Gb_18111 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_19470 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.14 | Archaeplastida | |
| Gb_19496 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Gb_19991 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_20099 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_24913 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_26216 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Gb_27662 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.26 | Archaeplastida | |
| Gb_29655 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_29909 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_33437 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.14 | Archaeplastida | |
| Gb_38173 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.2 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |