Description : DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana (sp|o22907|rh24_arath : 975.0)
Gene families : OG0007523 (Archaeplastida) Phylogenetic Tree(s): OG0007523_tree ,
OG_05_0008076 (LandPlants) Phylogenetic Tree(s): OG_05_0008076_tree ,
OG_06_0010194 (SeedPlants) Phylogenetic Tree(s): OG_06_0010194_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_12460 | |
Cluster | HCCA: Cluster_317 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020903.17 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... | 0.02 | Archaeplastida | |
Cre12.g522850 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... | 0.02 | Archaeplastida | |
GSVIVT01028137001 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
Mp4g12240.1 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Smo51367 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Solyc01g079330.3.1 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Zm00001e001454_P001 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... | 0.02 | Archaeplastida | |
Zm00001e038325_P002 | No alias | DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
BP | GO:0009056 | catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No external refs found! |