Gb_26813 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.03 | Archaeplastida | |
Gb_26814 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.04 | Archaeplastida | |
Gb_40899 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.02 | Archaeplastida | |
LOC_Os01g13560.1 | No alias | CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
LOC_Os02g36845.1 | No alias | Casparian strip membrane protein 7 OS=Oryza sativa... | 0.03 | Archaeplastida | |
LOC_Os04g38690.1 | No alias | Casparian strip membrane protein 1 OS=Oryza rufipogon... | 0.03 | Archaeplastida | |
LOC_Os04g58760.1 | No alias | Casparian strip membrane protein 1 OS=Oryza sativa... | 0.03 | Archaeplastida | |
LOC_Os05g15630.1 | No alias | CASP-like protein BLE3 OS=Oryza sativa subsp. indica... | 0.02 | Archaeplastida | |
LOC_Os06g12500.1 | No alias | Casparian strip membrane protein 3 OS=Oryza sativa... | 0.04 | Archaeplastida | |
LOC_Os12g41690.1 | No alias | CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
MA_10431939g0010 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.03 | Archaeplastida | |
MA_5227376g0010 | No alias | Casparian strip membrane protein 1 OS=Picea glauca... | 0.03 | Archaeplastida | |
MA_5618864g0010 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.06 | Archaeplastida | |
MA_64798g0010 | No alias | Casparian strip membrane protein 1 OS=Picea glauca... | 0.03 | Archaeplastida | |
MA_67384g0020 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.04 | Archaeplastida | |
MA_90653g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_93690g0010 | No alias | Casparian strip membrane protein 1 OS=Pinus taeda... | 0.05 | Archaeplastida | |
MA_94788g0010 | No alias | CASP-like protein 1U1 OS=Picea sitchensis... | 0.03 | Archaeplastida | |
Pp3c14_2270V3.1 | No alias | Uncharacterised protein family (UPF0497) | 0.04 | Archaeplastida | |
Pp3c22_13920V3.1 | No alias | Uncharacterised protein family (UPF0497) | 0.02 | Archaeplastida | |
Solyc01g067330.3.1 | No alias | CASP-like protein 1E1 OS=Glycine max... | 0.05 | Archaeplastida | |
Solyc02g069730.3.1 | No alias | CASP-like protein 1B1 OS=Ricinus communis... | 0.05 | Archaeplastida | |
Solyc02g088160.4.1 | No alias | Casparian strip membrane protein 3 OS=Oryza sativa... | 0.04 | Archaeplastida | |
Solyc04g005620.3.1 | No alias | Casparian strip membrane protein 2 OS=Solanum demissum... | 0.05 | Archaeplastida | |
Solyc05g007790.3.1 | No alias | Casparian strip membrane protein 2 OS=Solanum demissum... | 0.01 | Archaeplastida | |
Solyc06g072550.3.1 | No alias | CASP-like protein 1F1 OS=Vitis vinifera... | 0.01 | Archaeplastida | |
Solyc06g074230.3.1 | No alias | Casparian strip membrane protein 2 OS=Triphysaria... | 0.04 | Archaeplastida | |
Solyc09g010200.4.1 | No alias | Casparian strip membrane protein 1 OS=Nicotiana tabacum... | 0.05 | Archaeplastida | |
Solyc10g083250.2.1 | No alias | Casparian strip membrane protein 1 OS=Nicotiana tabacum... | 0.05 | Archaeplastida | |
Zm00001e003216_P001 | No alias | CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) | 0.02 | Archaeplastida | |
Zm00001e006491_P001 | No alias | Casparian strip membrane protein 2 OS=Zea mays... | 0.02 | Archaeplastida | |
Zm00001e015806_P001 | No alias | Casparian strip membrane protein 3 OS=Sorghum bicolor... | 0.03 | Archaeplastida | |
Zm00001e017631_P001 | No alias | CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) | 0.03 | Archaeplastida | |
Zm00001e024279_P001 | No alias | Casparian strip membrane protein 2 OS=Sorghum bicolor... | 0.02 | Archaeplastida | |
Zm00001e026902_P001 | No alias | CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) | 0.05 | Archaeplastida | |
Zm00001e033338_P001 | No alias | CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 205.0) | 0.02 | Archaeplastida | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
BP | GO:0006839 | mitochondrial transport | IEP | Neighborhood |
BP | GO:0006848 | pyruvate transport | IEP | Neighborhood |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Neighborhood | Gb_12490 details
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- Species
- Gingko biloba
- Sequence
- Gb_12490
Gb_12490
Description : Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana (sp|q6nku9|ti223_arath : 187.0)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type | Description | Actions |
Neighborhood | HRR: Gb_12490 | |
Cluster | HCCA: Cluster_40 | |
Expression Context Conservation (ECC)
Target | Alias | Description | ECC score | Gene Family Method | Actions |
AT4G26670 | No alias | Mitochondrial import inner membrane translocase subunit... | 0.03 | Archaeplastida | |
MA_43405g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005840 | ribosome | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006412 | translation | IEP | Neighborhood |
BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
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