Gb_12538

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0027374 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_12538
Cluster	HCCA: Cluster_252

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00102530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00216970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00077p00103580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	Archaeplastida
AT2G37260	WRKY44, TTG2,...	WRKY family transcription factor family protein	0.06	Archaeplastida
AT5G28650	WRKY74, ATWRKY74	WRKY DNA-binding protein 74	0.02	Archaeplastida
GSVIVT01008553001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01015952001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01029265001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01032662001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g43550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g61080.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g55080.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g45230.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
LOC_Os05g46020.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10434450g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_120697g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_306130g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_310991g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_49848g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_76002g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Pp3c3_8830V3.1	No alias	WRKY DNA-binding protein 23	0.04	Archaeplastida
Pp3c4_15559V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Solyc03g095770.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc03g116890.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g011200.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e007834_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e014245_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020417_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e022296_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025096_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e031518_P004	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Neighborhood
MF	GO:0004089	carbonate dehydratase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006551	leucine metabolic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009098	leucine biosynthetic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	161	201

External Links

No external refs found!

Gb_12538

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation