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  5. Gb_12553

Gb_12553


Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 671.0)


Gene families : OG0016282 (Archaeplastida) Phylogenetic Tree(s): OG0016282_tree ,
OG_05_0022161 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021576 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12553
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Gb_08671 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_181514g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 742 866
IPR002885 Pentatricopeptide_repeat 111 136
IPR002885 Pentatricopeptide_repeat 442 467
IPR002885 Pentatricopeptide_repeat 644 668
IPR002885 Pentatricopeptide_repeat 310 336
IPR002885 Pentatricopeptide_repeat 337 363
IPR002885 Pentatricopeptide_repeat 569 617
IPR002885 Pentatricopeptide_repeat 238 284
IPR002885 Pentatricopeptide_repeat 137 184
IPR002885 Pentatricopeptide_repeat 468 515
IPR002885 Pentatricopeptide_repeat 366 414
No external refs found!