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Gb_12570


Description : histone (H2A)


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12570
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00221900 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AMTR_s00058p00158560 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.06 Archaeplastida
AT1G51060 HTA10 histone H2A 10 0.02 Archaeplastida
AT1G54690 GAMMA-H2AX,... gamma histone variant H2AX 0.03 Archaeplastida
AT4G27230 HTA2 histone H2A 2 0.03 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre13.g590800 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre13.g591150 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.06 Archaeplastida
GSVIVT01011034001 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
Gb_06384 No alias histone (H2A) 0.03 Archaeplastida
Gb_07070 No alias histone (H2A) 0.05 Archaeplastida
Gb_25326 No alias histone (H2A) 0.04 Archaeplastida
LOC_Os03g17100.1 No alias histone (H2A) 0.02 Archaeplastida
LOC_Os05g02300.1 No alias histone (H2A) 0.04 Archaeplastida
LOC_Os07g36130.1 No alias histone (H2A) 0.03 Archaeplastida
LOC_Os07g36140.1 No alias histone (H2A) 0.04 Archaeplastida
LOC_Os08g33100.1 No alias histone (H2A) 0.05 Archaeplastida
LOC_Os12g25120.1 No alias histone (H2A) 0.03 Archaeplastida
MA_169054g0020 No alias histone (H2A) 0.03 Archaeplastida
MA_213048g0010 No alias histone (H2A) 0.04 Archaeplastida
MA_22203g0020 No alias histone (H2A) 0.04 Archaeplastida
MA_962778g0010 No alias histone (H2A) 0.04 Archaeplastida
Mp2g00760.1 No alias histone (H2A) 0.03 Archaeplastida
Mp3g00840.1 No alias histone (H2A) 0.03 Archaeplastida
Mp3g02370.1 No alias histone (H2A) 0.02 Archaeplastida
Pp3c6_29410V3.1 No alias histone H2A 10 0.02 Archaeplastida
Smo166626 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Solyc01g099410.3.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc03g005220.4.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc06g084430.4.1 No alias histone (H2A) 0.05 Archaeplastida
Solyc09g010400.3.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.05 Archaeplastida
Solyc09g082710.3.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc10g006560.4.1 No alias histone (H2A) 0.04 Archaeplastida
Solyc11g073250.2.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc12g005270.2.1 No alias histone (H2A) 0.05 Archaeplastida
Zm00001e010232_P001 No alias histone (H2A) 0.04 Archaeplastida
Zm00001e011643_P001 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e020483_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e033014_P001 No alias histone (H2A) 0.02 Archaeplastida
Zm00001e034815_P001 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e035183_P002 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e038465_P002 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e039735_P001 No alias histone (H2A) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP

GO:0022414		 reproductive process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 90 124
IPR007125 Histone_H2A/H2B/H3 10 87
No external refs found!