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  5. Gb_12573

Gb_12573


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 452.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0012081 (LandPlants) Phylogenetic Tree(s): OG_05_0012081_tree ,
OG_06_0012161 (SeedPlants) Phylogenetic Tree(s): OG_06_0012161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12573
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009496001 No alias Pentatricopeptide repeat-containing protein At2g04860... 0.03 Archaeplastida
Gb_08890 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.03 Archaeplastida
Pp3c16_5160V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 321 344
IPR002885 Pentatricopeptide_repeat 144 192
IPR002885 Pentatricopeptide_repeat 246 293
IPR002885 Pentatricopeptide_repeat 43 91
No external refs found!