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  5. AT2G27260

AT2G27260


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0000194 (SeedPlants) Phylogenetic Tree(s): OG_06_0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G27260
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00215650 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00030p00216100 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT1G61760 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
AT4G05220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01012622001 No alias No description available 0.05 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00037 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_01957 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04457 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_26587 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g59680.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g64450.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g64470.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os04g58090.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g58850.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g36210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10155182g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432342g0010 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432342g0020 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_112233g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_467179g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5350879g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_86810g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp7g19340.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c10_5660V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.03 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g080100.1.1 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g081970.2.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc10g081980.2.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004504_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006462_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e009420_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e010501_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012610_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e020501_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034803_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039222_P001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP Neighborhood
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0001763 morphogenesis of a branching structure IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0004644 phosphoribosylglycinamide formyltransferase activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005344 oxygen carrier activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010223 secondary shoot formation IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
BP GO:0010346 shoot axis formation IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015669 gas transport IEP Neighborhood
BP GO:0015671 oxygen transport IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015865 purine nucleotide transport IEP Neighborhood
BP GO:0015866 ADP transport IEP Neighborhood
BP GO:0015867 ATP transport IEP Neighborhood
BP GO:0015868 purine ribonucleotide transport IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0051503 adenine nucleotide transport IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0071782 endoplasmic reticulum tubular network IEP Neighborhood
BP GO:0071786 endoplasmic reticulum tubular network organization IEP Neighborhood
BP GO:0080024 indolebutyric acid metabolic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
CC GO:0098827 endoplasmic reticulum subcompartment IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 117 205
No external refs found!