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Description : BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G01410.1); Has 250 Blast hits to 250 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 250; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0047493 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0047339 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042111 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G27270 | |
| Cluster | HCCA: Cluster_22 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0000578 | embryonic axis specification | IEP | Neighborhood |
| BP | GO:0002229 | defense response to oomycetes | IEP | Neighborhood |
| BP | GO:0002239 | response to oomycetes | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004708 | MAP kinase kinase activity | IEP | Neighborhood |
| MF | GO:0005344 | oxygen carrier activity | IEP | Neighborhood |
| MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005484 | SNAP receptor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005635 | nuclear envelope | IEP | Neighborhood |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0006417 | regulation of translation | IEP | Neighborhood |
| BP | GO:0006446 | regulation of translational initiation | IEP | Neighborhood |
| BP | GO:0006862 | nucleotide transport | IEP | Neighborhood |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0006983 | ER overload response | IEP | Neighborhood |
| BP | GO:0007029 | endoplasmic reticulum organization | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0009269 | response to desiccation | IEP | Neighborhood |
| BP | GO:0009301 | snRNA transcription | IEP | Neighborhood |
| BP | GO:0009415 | response to water | IEP | Neighborhood |
| BP | GO:0009555 | pollen development | IEP | Neighborhood |
| BP | GO:0009798 | axis specification | IEP | Neighborhood |
| BP | GO:0009880 | embryonic pattern specification | IEP | Neighborhood |
| BP | GO:0009887 | animal organ morphogenesis | IEP | Neighborhood |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009908 | flower development | IEP | Neighborhood |
| BP | GO:0009942 | longitudinal axis specification | IEP | Neighborhood |
| BP | GO:0009945 | radial axis specification | IEP | Neighborhood |
| BP | GO:0009956 | radial pattern formation | IEP | Neighborhood |
| CC | GO:0010008 | endosome membrane | IEP | Neighborhood |
| BP | GO:0010080 | regulation of floral meristem growth | IEP | Neighborhood |
| BP | GO:0010223 | secondary shoot formation | IEP | Neighborhood |
| BP | GO:0010286 | heat acclimation | IEP | Neighborhood |
| BP | GO:0010346 | shoot axis formation | IEP | Neighborhood |
| BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | Neighborhood |
| BP | GO:0010506 | regulation of autophagy | IEP | Neighborhood |
| BP | GO:0010507 | negative regulation of autophagy | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015669 | gas transport | IEP | Neighborhood |
| BP | GO:0015671 | oxygen transport | IEP | Neighborhood |
| BP | GO:0015711 | organic anion transport | IEP | Neighborhood |
| BP | GO:0015748 | organophosphate ester transport | IEP | Neighborhood |
| BP | GO:0015865 | purine nucleotide transport | IEP | Neighborhood |
| BP | GO:0015866 | ADP transport | IEP | Neighborhood |
| BP | GO:0015867 | ATP transport | IEP | Neighborhood |
| BP | GO:0015868 | purine ribonucleotide transport | IEP | Neighborhood |
| BP | GO:0015893 | drug transport | IEP | Neighborhood |
| BP | GO:0016073 | snRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
| MF | GO:0016621 | cinnamoyl-CoA reductase activity | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | Neighborhood |
| CC | GO:0030176 | integral component of endoplasmic reticulum membrane | IEP | Neighborhood |
| MF | GO:0030371 | translation repressor activity | IEP | Neighborhood |
| CC | GO:0031227 | intrinsic component of endoplasmic reticulum membrane | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Neighborhood |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0034635 | glutathione transport | IEP | Neighborhood |
| BP | GO:0035265 | organ growth | IEP | Neighborhood |
| BP | GO:0042939 | tripeptide transport | IEP | Neighborhood |
| BP | GO:0043696 | dedifferentiation | IEP | Neighborhood |
| BP | GO:0043697 | cell dedifferentiation | IEP | Neighborhood |
| BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | Neighborhood |
| MF | GO:0045182 | translation regulator activity | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0048229 | gametophyte development | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051503 | adenine nucleotide transport | IEP | Neighborhood |
| BP | GO:0060184 | cell cycle switching | IEP | Neighborhood |
| BP | GO:0060771 | phyllotactic patterning | IEP | Neighborhood |
| BP | GO:0060772 | leaf phyllotactic patterning | IEP | Neighborhood |
| BP | GO:0060774 | auxin mediated signaling pathway involved in phyllotactic patterning | IEP | Neighborhood |
| BP | GO:0071216 | cellular response to biotic stimulus | IEP | Neighborhood |
| BP | GO:0071365 | cellular response to auxin stimulus | IEP | Neighborhood |
| BP | GO:0071368 | cellular response to cytokinin stimulus | IEP | Neighborhood |
| CC | GO:0071458 | integral component of cytoplasmic side of endoplasmic reticulum membrane | IEP | Neighborhood |
| CC | GO:0071782 | endoplasmic reticulum tubular network | IEP | Neighborhood |
| BP | GO:0071786 | endoplasmic reticulum tubular network organization | IEP | Neighborhood |
| BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Neighborhood |
| BP | GO:0072337 | modified amino acid transport | IEP | Neighborhood |
| BP | GO:0080024 | indolebutyric acid metabolic process | IEP | Neighborhood |
| BP | GO:0090351 | seedling development | IEP | Neighborhood |
| BP | GO:0090567 | reproductive shoot system development | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0098781 | ncRNA transcription | IEP | Neighborhood |
| CC | GO:0098827 | endoplasmic reticulum subcompartment | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |