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  5. Gb_12857

Gb_12857


Description : Cysteine proteinase RD21A OS=Arabidopsis thaliana (sp|p43297|rd21a_arath : 582.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 345.6)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0000929 (SeedPlants) Phylogenetic Tree(s): OG_06_0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12857
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00208220 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00061p00214890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AMTR_s00061p00215070 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AMTR_s00061p00215230 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215400 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00090p00106390 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.04 Archaeplastida
AT3G48340 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.03 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.05 Archaeplastida
Cre09.g407700 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
LOC_Os04g55650.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_126501g0010 No alias Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_22695g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.02 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c18_11500V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Pp3c19_6730V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Pp3c23_20820V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Pp3c8_20370V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Smo270344 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g076690.3.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc02g076710.3.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc02g076910.3.1 No alias protease (Papain) 0.04 Archaeplastida
Solyc12g088670.2.1 No alias Low-temperature-induced cysteine proteinase (Fragment)... 0.05 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006743_P002 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e041788_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 43 99
IPR000118 Granulin 379 426
IPR000668 Peptidase_C1A_C 130 345
No external refs found!