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  5. Gb_12907

Gb_12907


Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana (sp|q8lds4|nakr1_arath : 92.8)


Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000136 (LandPlants) Phylogenetic Tree(s): OG_05_0000136_tree ,
OG_06_0000808 (SeedPlants) Phylogenetic Tree(s): OG_06_0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12907
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00054220 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 30... 0.03 Archaeplastida
AMTR_s00076p00095550 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 31... 0.02 Archaeplastida
AT2G28660 No alias Chloroplast-targeted copper chaperone protein 0.04 Archaeplastida
AT3G05220 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT4G39700 No alias Heavy metal transport/detoxification superfamily protein 0.04 Archaeplastida
AT5G02600 NAKR1 Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
AT5G17450 HIPP21 Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
AT5G19090 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
GSVIVT01008979001 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 Archaeplastida
GSVIVT01013424001 No alias No description available 0.02 Archaeplastida
GSVIVT01019700001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.05 Archaeplastida
GSVIVT01025864001 No alias Heavy metal-associated isoprenylated plant protein 45... 0.02 Archaeplastida
Gb_09171 No alias Heavy metal-associated isoprenylated plant protein 20... 0.04 Archaeplastida
LOC_Os01g03490.1 No alias Heavy metal-associated isoprenylated plant protein 37... 0.04 Archaeplastida
LOC_Os01g74490.1 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g02860.1 No alias Heavy metal-associated isoprenylated plant protein 30... 0.02 Archaeplastida
LOC_Os05g30570.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g40130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_101835g0010 No alias Heavy metal-associated isoprenylated plant protein 21... 0.02 Archaeplastida
MA_13573g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.05 Archaeplastida
MA_165810g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_20279g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
MA_54284g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 Archaeplastida
MA_71520g0010 No alias Heavy metal-associated isoprenylated plant protein 28... 0.04 Archaeplastida
Pp3c18_2310V3.1 No alias Heavy metal transport/detoxification superfamily protein 0.02 Archaeplastida
Pp3c9_17880V3.1 No alias Heavy metal transport/detoxification superfamily protein 0.03 Archaeplastida
Smo409960 No alias No description available 0.02 Archaeplastida
Smo446343 No alias Heavy metal-associated isoprenylated plant protein 28... 0.03 Archaeplastida
Solyc01g065690.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g076880.4.1 No alias Heavy metal-associated isoprenylated plant protein 28... 0.02 Archaeplastida
Solyc03g043640.3.1 No alias Heavy metal-associated isoprenylated plant protein 21... 0.02 Archaeplastida
Zm00001e000154_P001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.04 Archaeplastida
Zm00001e003565_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014316_P002 No alias Heavy metal-associated isoprenylated plant protein 32... 0.02 Archaeplastida
Zm00001e017051_P001 No alias Heavy metal-associated isoprenylated plant protein 37... 0.02 Archaeplastida
Zm00001e024870_P001 No alias Heavy metal-associated isoprenylated plant protein 32... 0.03 Archaeplastida
Zm00001e025710_P001 No alias Heavy metal-associated isoprenylated plant protein 33... 0.02 Archaeplastida
Zm00001e029729_P001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.04 Archaeplastida
Zm00001e039336_P002 No alias Heavy metal-associated isoprenylated plant protein 32... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 157 206
No external refs found!