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Description : E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana (sp|q8lpn7|rng1l_arath : 167.0)
Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0003946 (SeedPlants) Phylogenetic Tree(s): OG_06_0003946_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_12946 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00119p00089020 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | Archaeplastida | |
| AT1G50350 | No alias | BEST Arabidopsis thaliana protein match is: RING/U-box... | 0.03 | Archaeplastida | |
| AT1G55530 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
| AT2G40830 | RHC1A | RING-H2 finger C1A | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000880.42 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| Gb_22125 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.04 | Archaeplastida | |
| LOC_Os01g44240.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os06g42700.1 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os08g38060.1 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os12g04590.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_79051g0010 | No alias | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.05 | Archaeplastida | |
| Pp3c11_26010V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c2_5960V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Solyc03g098590.3.1 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006479 | protein methylation | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016151 | nickel cation binding | IEP | Neighborhood |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016571 | histone methylation | IEP | Neighborhood |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032259 | methylation | IEP | Neighborhood |
| BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 218 | 260 |
| No external refs found! |