AT1G09630 (ATRABA2A, ATRAB11C,...)


Aliases : ATRABA2A, ATRAB11C, ATRAB-A2A, RAB-A2A, RAB11c

Description : RAB GTPase 11C


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09630
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT3G12160 RABA4D, ATRABA4D RAB GTPase homolog A4D 0.03 Archaeplastida
Cpa|evm.model.tig00020961.97 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Cre03.g189250 No alias Vesicle trafficking.regulation of membrane tethering and... 0.04 Archaeplastida
GSVIVT01020651001 No alias Ras-related protein RABA1e OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
Gb_37703 No alias A-class RAB GTPase 0.04 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.04 Archaeplastida
LOC_Os06g35814.1 No alias A-class RAB GTPase 0.06 Archaeplastida
LOC_Os10g23100.1 No alias A-class RAB GTPase 0.1 Archaeplastida
MA_109703g0010 No alias A-class RAB GTPase 0.03 Archaeplastida
Pp3c14_15250V3.1 No alias RAB GTPase homolog A2B 0.05 Archaeplastida
Pp3c2_10280V3.1 No alias RAB GTPase homolog A2B 0.02 Archaeplastida
Solyc06g005810.3.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Solyc10g045550.2.1 No alias A-class RAB GTPase 0.05 Archaeplastida
Zm00001e030680_P001 No alias A-class RAB GTPase 0.05 Archaeplastida
Zm00001e038828_P001 No alias A-class RAB GTPase 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
CC GO:0009504 cell plate IDA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0019932 second-messenger-mediated signaling RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
MF GO:0003727 single-stranded RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004774 succinate-CoA ligase activity IEP Neighborhood
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0007292 female gamete generation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008143 poly(A) binding IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010078 maintenance of root meristem identity IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010311 lateral root formation IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016004 phospholipase activator activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022604 regulation of cell morphogenesis IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051510 regulation of unidimensional cell growth IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
MF GO:0060229 lipase activator activity IEP Neighborhood
BP GO:0060968 regulation of gene silencing IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0070717 poly-purine tract binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:2000030 regulation of response to red or far red light IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!