Gb_13100

Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 613.0)

Gene families : OG0031361 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029329 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027819 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_13100
Cluster	HCCA: Cluster_257

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_335048g0010	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	610	733
IPR002885	Pentatricopeptide_repeat	310	333
IPR002885	Pentatricopeptide_repeat	511	534
IPR002885	Pentatricopeptide_repeat	133	180
IPR002885	Pentatricopeptide_repeat	336	382
IPR002885	Pentatricopeptide_repeat	436	483
IPR002885	Pentatricopeptide_repeat	234	281
IPR002885	Pentatricopeptide_repeat	33	79

External Links

No external refs found!

Gb_13100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation