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  5. AT2G27630

AT2G27630


Description : Ubiquitin carboxyl-terminal hydrolase-related protein


Gene families : OG0008122 (Archaeplastida) Phylogenetic Tree(s): OG0008122_tree ,
OG_05_0006728 (LandPlants) Phylogenetic Tree(s): OG_05_0006728_tree ,
OG_06_0004261 (SeedPlants) Phylogenetic Tree(s): OG_06_0004261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G27630
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G65120 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 Archaeplastida
AT2G34240 No alias Protein with domains of unknown function DUF627 and DUF632 0.01 Archaeplastida
AT5G61950 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000418 RNA polymerase IV complex IEP Neighborhood
BP GO:0000959 mitochondrial RNA metabolic process IEP Neighborhood
MF GO:0003720 telomerase activity IEP Neighborhood
MF GO:0003721 telomerase RNA reverse transcriptase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0007004 telomere maintenance via telomerase IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
BP GO:0009662 etioplast organization IEP Neighborhood
BP GO:0010495 long-distance posttranscriptional gene silencing IEP Neighborhood
BP GO:0010833 telomere maintenance via telomere lengthening IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
CC GO:0031354 intrinsic component of plastid outer membrane IEP Neighborhood
CC GO:0031355 integral component of plastid outer membrane IEP Neighborhood
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP Neighborhood
CC GO:0031359 integral component of chloroplast outer membrane IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0050000 chromosome localization IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0080156 mitochondrial mRNA modification IEP Neighborhood
BP GO:1900864 mitochondrial RNA modification IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006865 DUF629 196 644
IPR006866 DUF627_N 18 125
No external refs found!