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  5. Gb_13319

Gb_13319


Description : Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana (sp|q9fmf6|pp444_arath : 197.0)


Gene families : OG0011448 (Archaeplastida) Phylogenetic Tree(s): OG0011448_tree ,
OG_05_0011928 (LandPlants) Phylogenetic Tree(s): OG_05_0011928_tree ,
OG_06_0013720 (SeedPlants) Phylogenetic Tree(s): OG_06_0013720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13319
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
MA_807172g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 446
IPR002885 Pentatricopeptide_repeat 553 579
IPR002885 Pentatricopeptide_repeat 354 382
IPR002885 Pentatricopeptide_repeat 248 277
IPR002885 Pentatricopeptide_repeat 89 118
IPR002885 Pentatricopeptide_repeat 585 611
IPR002885 Pentatricopeptide_repeat 476 524
IPR002885 Pentatricopeptide_repeat 617 666
No external refs found!