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  5. Gb_13550

Gb_13550


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0026841 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13550
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
GSVIVT01018942001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01023585001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_21366 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g55250.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g41320.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc06g072520.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e012110_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e018857_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e028489_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e034446_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 395 442
No external refs found!